SPDP 试剂的胺反应部分是 N-羟基琥珀酰亚胺(NHS)酯。反应最通常在 pH 7-8 的磷酸盐、碳酸盐/碳酸氢盐或硼酸盐缓冲液中进行。可以使用其他不包含伯胺(或硫醇或二硫化物还原剂–参见巯基反应性的讨论)的缓冲剂。pH 值越高,反应和水解降解的速率越大;例如,NHS 酯的半衰期在 pH 值为 7 时为数小时,而在 pH 值为 9 时不到 10 分钟。SPDP 和 LC-SPDP 等 NHS 酯试剂的水溶性有限,在将其添加到反应混合物之前,必须先将其溶于有机溶剂中。诸如 Sulfo-LC-SPDP 的 Sulfo-NHS-酯试剂是水溶性的,可以直接添加到水性反应混合物中。 特点和优势: 反应性基团:NHS 酯和吡啶基二硫醇 对以下分子具有反应性:氨基和巯基 与游离巯基反应时释放出可检测的副产物;通过测量 343 nm 处吡啶-2-硫酮的释放,可以轻松地跟踪反应进度 间隔臂中的二硫键在pH 8.5条件下易于被10-50mM DTT或TCEP裂解 减少 SDS-PAGE 上样缓冲液,也易于使间隔臂裂解 使用可裂解交联剂,能够实现交联产物的分离 水不溶性(先溶于 DMF 或 DMSO) SPDP 交联剂可透过膜,因此可以在细胞内部进行交联 与其他品种的 SPDP 型试剂进行比较,包括聚乙二醇化形式 The amine-reactive portion of SPDP reagents is the N-hydroxysuccinimide (NHS) ester. Reactions are most commonly performed in phosphate, carbonate/bicarbonate, or borate buffers at pH 7-8. Other buffers can be used provided they do not contain primary amines (or thiols or disulfide reducing reagents – see discussion of the sulfhydryl reactivity). The rate of reaction and degradation by hydrolysis increases with increasing pH; for example, the half-life of the NHS ester is several hours at pH 7 and less than 10 minutes at pH 9. NHS-ester reagents like SPDP and LC-SPDP have limited aqueous solubility and must be dissolved in organic solvent before adding them to a reaction mixture. Sulfo-NHS-ester reagents like Sulfo-LC-SPDP are water-soluble and can be added directly to aqueous reaction mixtures. Features and advantages: Reactive groups: NHS ester and pyridyldithiol Reactive towards: amino and sulfhydryl groups Releases a detectable by-product when reacted with a free sulfhydryl group; by measuring the release of pyridine-2-thione at 343 nm, the reaction can be easily followed Disulfide bond in the spacer arm is readily cleaved by 10-50 mM DTT or TCEP at pH 8.5 Spacer arm is also easily cleaved using reducing SDS-PAGE sample loading buffer Cleavable crosslinker allows separation of crosslinked products Water-insoluble (dissolve first in DMF or DMSO) SPDP crosslinker is membrane permeable, so crosslinking can be done inside the cells Compare to other varieties of SPDP-type reagents, including pegylated forms
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SPDP-C6-NHS ester
CAS number:158913-22-5 molecular formula:C18H23N3O5S2
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Specs
| Chinese alias | LC-SPDP(琥珀酰亚胺基6-[3(2-吡啶基二硫代)丙酰胺基己酸己酸酯) | ||
| English alias | Propanamide, N-(6-((2,5-dioxo-1-pyrrolidinyl)oxy)-6-oxohexyl)-3-(2-pyridinyldithio)- | Hexanoic acid, 6-[[1-oxo-3-(2-pyridinyldithio)propyl]amino]-, 2,5-dioxo-1-pyrrolidinyl ester | MS-27499 | 1-Phenyl-2,3-indolinedione, NSC 100013 | MFCD00083163 | N-(6-( | ||
| CAS number | 158913-22-5 | molecular formula | C18H23N3O5S2 |
| molecular weight | 425.52 g/mol | Exact mass | ≥90% |
| PSA | 156.000 Ų | logp | 1 |
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MSDS
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158913-22-5 | LC-SPDP (succinimidyl 6-(3(2-pyridyldithio)propionamido)hexanoate).pdf





